Systems biology | Robert Bosch Center for Data Science and Artificial Intelligence

people

Sridharakumar Narasimhan

Professor

Fault Diagnosis, Process Control, Optimization, System Identification, Systems biology

Arjun Sarathi

Project Associate

Transcriptomic Data Analysis, Computational Biology, Systems Biology

Sundari Ramji

Postdoctoral Fellow

Systems Biology, Computational Modelling

Lavanya Raajaraam

PhD Scholar

Metabolic engineering, Systems biology"

publications

Sloppiness: Fundamental study, new formalism and its application in model assessment

Prem Jagadeesan , Karthik Raman , Arun K. Tangirala

PloS one

Multi-omic data helps improve prediction of personalised tumor suppressors and oncogenes

Malvika Sudhakar , Raghunathan Rengaswamy , Karthik Raman

Frontiers in Genetics

Designing Biological Circuits: From Principles to Applications

Debomita Chakraborty , Raghunathan Rengaswamy , Karthik Raman

ACS Synthetic Biology

A Computational Framework to Identify Metabolic Engineering Strategies for the Co-Production of Metabolites

Lavanya Raajaraam , Karthik Raman

Frontiers in Bioengineering and Biotechnology- Synthetic Biology

Novel ratio-metric features enable the identification of new driver genes across cancer types

Malvika Sudhakar , Raghunathan Rengaswamy , Karthik Raman

Scientific Reports

Two-species community design of lactic acid bacteria for optimal production of lactate

Maziya Ibrahim , Karthik Raman

Computational and Structural Biotechnology Journal

NetGenes: A database of essential genes predicted using features from interaction networks

V Senthamizhan , Balaraman Ravindran , Karthik Raman

Frontiers in Genetics

A priori parameter identifiability in models with non-rational functions

Rishabh Jain , Sridharakumar Narasimhan , Nirav P. Bhatt

Automatica

Systems-Theoretic Approaches to Design Biological Networks with Desired Functionalities

Priyan Bhattacharya , Karthik Raman , Arun K. Tangirala

Computational Methods in Synthetic Biology

SBML Level 3: an extensible format for the exchange and reuse of biological models

Sarah M Keating , Dagmar Waltemath , Matthias König and more

Molecular Systems Biology

MINREACT: an efficient algorithm for identifying minimal metabolic networks

Gayathri Sambamoorthy , Karthik Raman

bioRxiv

Systems-Level Modelling of Microbial Communities: Theory and Practice

Aarthi Ravikrishnan , Karthik Raman

Book

Metabolite systems profiling identifies exploitable weaknesses in retinoblastoma

Kumar R Sahoo S , Nicolay B Ranjith , Elchuri SV Miles and more

aheadofprint